Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarcc1P97496 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Smarcc1P97496 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc1P97496 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm7572-201ENSMUST00000182616 766 ntBASIC14.04□□□□□ -0.16
Smarcc1P97496 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm6644-201ENSMUST00000186507 951 ntBASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm2345-201ENSMUST00000193451 589 ntBASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm43966-201ENSMUST00000203301 612 ntBASIC14.04□□□□□ -0.16
Smarcc1P97496 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcc1P97496 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smarcc1P97496 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm12947-201ENSMUST00000116114 420 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm12745-201ENSMUST00000121767 214 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm33707-201ENSMUST00000195135 569 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Wbp1-209ENSMUST00000205023 716 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm44605-201ENSMUST00000206892 949 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm44640-201ENSMUST00000206894 247 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC14.03□□□□□ -0.16
Smarcc1P97496 AC134793.1-202ENSMUST00000227444 803 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Rps3a2-201ENSMUST00000074245 792 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Rps3a3-201ENSMUST00000074680 795 ntBASIC14.03□□□□□ -0.16
Smarcc1P97496 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcc1P97496 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc1P97496 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms