Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-3P97334 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-3P97334 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-3P97334 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-3P97334 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Gm12947-201ENSMUST00000116114 420 ntBASIC14.04□□□□□ -0.16
Nkx2-3P97334 Gm8659-201ENSMUST00000120024 1084 ntBASIC14.04□□□□□ -0.16
Nkx2-3P97334 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Gm7572-201ENSMUST00000182616 766 ntBASIC14.04□□□□□ -0.16
Nkx2-3P97334 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.04□□□□□ -0.16
Nkx2-3P97334 Gm6352-201ENSMUST00000203583 1134 ntBASIC14.04□□□□□ -0.16
Nkx2-3P97334 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx2-3P97334 AC174797.2-201ENSMUST00000225835 165 ntBASIC14.04□□□□□ -0.16
Nkx2-3P97334 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.04□□□□□ -0.16
Nkx2-3P97334 Prss23os-202ENSMUST00000179361 1362 ntBASIC14.04□□□□□ -0.16
Nkx2-3P97334 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-3P97334 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm9166-201ENSMUST00000120293 561 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm5395-201ENSMUST00000121650 915 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm23675-201ENSMUST00000157311 125 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm16107-201ENSMUST00000162523 862 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm9625-201ENSMUST00000180422 955 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm6331-201ENSMUST00000217890 450 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 AC160929.1-201ENSMUST00000221247 415 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 Gm17872-201ENSMUST00000222550 532 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 CT025689.1-201ENSMUST00000225214 283 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.03□□□□□ -0.16
Nkx2-3P97334 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-3P97334 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nkx2-3P97334 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-3P97334 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-3P97334 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-3P97334 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-3P97334 Gm5766-201ENSMUST00000160520 1977 ntBASIC14.02□□□□□ -0.16
Nkx2-3P97334 Gm43482-201ENSMUST00000202797 1861 ntBASIC14.02□□□□□ -0.16
Nkx2-3P97334 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-3P97334 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-3P97334 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.02□□□□□ -0.16
Nkx2-3P97334 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-3P97334 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC14.02□□□□□ -0.16
Nkx2-3P97334 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-3P97334 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx2-3P97334 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Nkx2-3P97334 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-3P97334 Gm23769-201ENSMUST00000104441 121 ntBASIC14.02□□□□□ -0.17
Nkx2-3P97334 Gm5764-201ENSMUST00000118817 885 ntBASIC14.02□□□□□ -0.17
Nkx2-3P97334 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-3P97334 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms