Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SgcbP82349 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SgcbP82349 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SgcbP82349 Gm13422-201ENSMUST00000118834 504 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Gm1848-201ENSMUST00000120711 789 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Gm12176-201ENSMUST00000121420 875 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Gm22846-201ENSMUST00000157706 270 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Olfml3-204ENSMUST00000169286 874 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SgcbP82349 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SgcbP82349 Mir7051-201ENSMUST00000184167 73 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.07□□□□□ -0.8
SgcbP82349 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.07□□□□□ -0.8
SgcbP82349 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.07□□□□□ -0.8
SgcbP82349 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.07□□□□□ -0.8
SgcbP82349 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SgcbP82349 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SgcbP82349 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SgcbP82349 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.07□□□□□ -0.8
SgcbP82349 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SgcbP82349 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.07□□□□□ -0.8
SgcbP82349 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SgcbP82349 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.07□□□□□ -0.8
SgcbP82349 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.07□□□□□ -0.8
SgcbP82349 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SgcbP82349 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.06□□□□□ -0.8
SgcbP82349 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcbP82349 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.06□□□□□ -0.8
SgcbP82349 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.06□□□□□ -0.8
SgcbP82349 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.06□□□□□ -0.8
SgcbP82349 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.06□□□□□ -0.8
SgcbP82349 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.06□□□□□ -0.8
SgcbP82349 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcbP82349 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.06□□□□□ -0.8
SgcbP82349 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.06□□□□□ -0.8
SgcbP82349 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SgcbP82349 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Snora73b-201ENSMUST00000083419 205 ntBASIC10.06□□□□□ -0.8
SgcbP82349 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SgcbP82349 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcbP82349 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcbP82349 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.06□□□□□ -0.8
SgcbP82349 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.06□□□□□ -0.8
SgcbP82349 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.06□□□□□ -0.8
SgcbP82349 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SgcbP82349 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcbP82349 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms