Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm23916-201ENSMUST00000158484 399 ntBASIC18■□□□□ 0.47
Cux2P70298 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC18■□□□□ 0.47
Cux2P70298 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC18■□□□□ 0.47
Cux2P70298 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cux2P70298 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cux2P70298 Gm28032-201ENSMUST00000184104 96 ntBASIC18■□□□□ 0.47
Cux2P70298 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Gm44716-201ENSMUST00000209007 710 ntBASIC18■□□□□ 0.47
Cux2P70298 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cux2P70298 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC18■□□□□ 0.47
Cux2P70298 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cux2P70298 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC18■□□□□ 0.47
Cux2P70298 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC18■□□□□ 0.47
Cux2P70298 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Gm17435-202ENSMUST00000212699 1998 ntBASIC18■□□□□ 0.47
Cux2P70298 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cux2P70298 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Gm13120-201ENSMUST00000117343 1446 ntBASIC18■□□□□ 0.47
Cux2P70298 Gm13104-201ENSMUST00000119651 1446 ntBASIC18■□□□□ 0.47
Cux2P70298 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cux2P70298 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Gm5697-201ENSMUST00000122295 2482 ntBASIC17.99■□□□□ 0.47
Cux2P70298 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cux2P70298 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC17.99■□□□□ 0.47
Cux2P70298 Gm18299-201ENSMUST00000192026 636 ntBASIC17.99■□□□□ 0.47
Cux2P70298 Gm7727-201ENSMUST00000219830 671 ntBASIC17.99■□□□□ 0.47
Cux2P70298 Gm26440-201ENSMUST00000082591 129 ntBASIC17.99■□□□□ 0.47
Cux2P70298 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cux2P70298 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cux2P70298 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cux2P70298 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC17.98■□□□□ 0.47
Cux2P70298 Gm8809-201ENSMUST00000119367 743 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Gm15664-201ENSMUST00000160167 184 ntBASIC17.98■□□□□ 0.47
Cux2P70298 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC17.98■□□□□ 0.47
Cux2P70298 Cacna2d3-208ENSMUST00000225985 918 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC17.98■□□□□ 0.47
Cux2P70298 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cux2P70298 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cux2P70298 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cux2P70298 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC17.98■□□□□ 0.47
Cux2P70298 AC154640.1-203ENSMUST00000228316 1618 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Gm43127-201ENSMUST00000195890 2789 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cux2P70298 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC17.98■□□□□ 0.47
Cux2P70298 Gm15720-201ENSMUST00000117133 282 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Gm12420-201ENSMUST00000119869 1048 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Gm23999-201ENSMUST00000158057 104 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Gm22876-201ENSMUST00000175450 298 ntBASIC17.98■□□□□ 0.47
Cux2P70298 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cux2P70298 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cux2P70298 CT025642.1-201ENSMUST00000224734 1219 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cux2P70298 Gm6378-201ENSMUST00000084199 444 ntBASIC17.98■□□□□ 0.47
Cux2P70298 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.98■□□□□ 0.47
Cux2P70298 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Gm38312-201ENSMUST00000195426 1746 ntBASIC17.97■□□□□ 0.47
Cux2P70298 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC17.97■□□□□ 0.47
Cux2P70298 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.97■□□□□ 0.47
Cux2P70298 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cux2P70298 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Cux2P70298 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms