Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Vps33bP59016 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Vps33bP59016 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33bP59016 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps33bP59016 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Vps33bP59016 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vps33bP59016 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vps33bP59016 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.02□□□□□ -0.16
Vps33bP59016 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33bP59016 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33bP59016 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33bP59016 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33bP59016 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vps33bP59016 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33bP59016 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33bP59016 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33bP59016 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps33bP59016 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.02□□□□□ -0.16
Vps33bP59016 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vps33bP59016 Gm12377-201ENSMUST00000118656 252 ntBASIC14.02□□□□□ -0.17
Vps33bP59016 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps33bP59016 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps33bP59016 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps33bP59016 Mir3091-201ENSMUST00000175086 76 ntBASIC14.02□□□□□ -0.17
Vps33bP59016 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Gm8525-201ENSMUST00000189674 861 ntBASIC14.02□□□□□ -0.17
Vps33bP59016 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.02□□□□□ -0.17
Vps33bP59016 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps33bP59016 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vps33bP59016 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Vps33bP59016 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps33bP59016 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.02□□□□□ -0.17
Vps33bP59016 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps33bP59016 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps33bP59016 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC14.01□□□□□ -0.17
Vps33bP59016 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.01□□□□□ -0.17
Vps33bP59016 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Gm4865-201ENSMUST00000196284 1309 ntBASIC14.01□□□□□ -0.17
Vps33bP59016 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps33bP59016 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Vps33bP59016 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Vps33bP59016 Gm12397-201ENSMUST00000117674 615 ntBASIC14.01□□□□□ -0.17
Vps33bP59016 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC14.01□□□□□ -0.17
Vps33bP59016 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Gm21631-201ENSMUST00000195041 754 ntBASIC14.01□□□□□ -0.17
Vps33bP59016 Gm7047-201ENSMUST00000196224 1063 ntBASIC14.01□□□□□ -0.17
Vps33bP59016 Gm18124-201ENSMUST00000210695 706 ntBASIC14.01□□□□□ -0.17
Vps33bP59016 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Vps33bP59016 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC14.01□□□□□ -0.17
Vps33bP59016 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps33bP59016 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vps33bP59016 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Vps33bP59016 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
Vps33bP59016 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vps33bP59016 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vps33bP59016 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
Vps33bP59016 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vps33bP59016 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps33bP59016 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms