Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC12.46□□□□□ -0.41
Tpm1P58771 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tpm1P58771 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.46□□□□□ -0.41
Tpm1P58771 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 Gm6092-201ENSMUST00000121659 2029 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 Gm11783-201ENSMUST00000119549 885 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 Gm8062-201ENSMUST00000139696 444 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.46□□□□□ -0.41
Tpm1P58771 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.46□□□□□ -0.41
Tpm1P58771 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tpm1P58771 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.46□□□□□ -0.41
Tpm1P58771 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Gm37597-201ENSMUST00000191853 382 ntBASIC12.46□□□□□ -0.41
Tpm1P58771 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tpm1P58771 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tpm1P58771 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tpm1P58771 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tpm1P58771 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Tpm1P58771 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tpm1P58771 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC12.46□□□□□ -0.42
Tpm1P58771 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC12.45□□□□□ -0.42
Tpm1P58771 Gm6714-201ENSMUST00000218677 2330 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Tpm1P58771 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Tpm1P58771 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Tpm1P58771 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.45□□□□□ -0.42
Tpm1P58771 Gm17420-201ENSMUST00000164753 153 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 Gm27627-201ENSMUST00000183644 150 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 Gm4857-201ENSMUST00000192718 785 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 Gm43433-201ENSMUST00000196573 481 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Tpm1P58771 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Tpm1P58771 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Tpm1P58771 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tpm1P58771 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tpm1P58771 Gm19165-201ENSMUST00000204453 1982 ntBASIC12.45□□□□□ -0.42
Tpm1P58771 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Tpm1P58771 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Tpm1P58771 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Tpm1P58771 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tpm1P58771 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.44□□□□□ -0.42
Tpm1P58771 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Tpm1P58771 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Tpm1P58771 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.44□□□□□ -0.42
Tpm1P58771 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.44□□□□□ -0.42
Tpm1P58771 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.44□□□□□ -0.42
Tpm1P58771 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.44□□□□□ -0.42
Tpm1P58771 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.44□□□□□ -0.42
Tpm1P58771 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Gm4978-201ENSMUST00000071565 801 ntBASIC12.44□□□□□ -0.42
Tpm1P58771 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms