Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
GdnfP48540 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
GdnfP48540 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.89□□□□□ -0.83
GdnfP48540 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.89□□□□□ -0.83
GdnfP48540 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
GdnfP48540 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.89□□□□□ -0.83
GdnfP48540 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
GdnfP48540 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
GdnfP48540 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
GdnfP48540 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.89□□□□□ -0.83
GdnfP48540 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
GdnfP48540 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
GdnfP48540 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.89□□□□□ -0.83
GdnfP48540 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
GdnfP48540 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
GdnfP48540 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.89□□□□□ -0.83
GdnfP48540 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Gm8956-201ENSMUST00000203939 825 ntBASIC9.89□□□□□ -0.83
GdnfP48540 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Gm34272-201ENSMUST00000208886 253 ntBASIC9.89□□□□□ -0.83
GdnfP48540 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.89□□□□□ -0.83
GdnfP48540 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
GdnfP48540 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
GdnfP48540 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.89□□□□□ -0.83
GdnfP48540 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.89□□□□□ -0.83
GdnfP48540 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.89□□□□□ -0.83
GdnfP48540 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
GdnfP48540 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.89□□□□□ -0.83
GdnfP48540 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.89□□□□□ -0.83
GdnfP48540 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
GdnfP48540 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.88□□□□□ -0.83
GdnfP48540 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
GdnfP48540 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.88□□□□□ -0.83
GdnfP48540 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.88□□□□□ -0.83
GdnfP48540 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.88□□□□□ -0.83
GdnfP48540 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.88□□□□□ -0.83
GdnfP48540 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
GdnfP48540 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.88□□□□□ -0.83
GdnfP48540 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.88□□□□□ -0.83
GdnfP48540 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
GdnfP48540 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.88□□□□□ -0.83
GdnfP48540 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
GdnfP48540 Gm22133-201ENSMUST00000102082 109 ntBASIC9.88□□□□□ -0.83
GdnfP48540 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
GdnfP48540 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
GdnfP48540 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms