Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Sox18P43680 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox18P43680 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Sox18P43680 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Gm14746-201ENSMUST00000120309 741 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Mir1905-201ENSMUST00000122779 82 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Gm24943-201ENSMUST00000158329 433 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Gm25830-201ENSMUST00000158923 132 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox18P43680 Gm6140-201ENSMUST00000192494 966 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Gm43163-201ENSMUST00000196571 442 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox18P43680 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox18P43680 Gm45094-201ENSMUST00000207013 617 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox18P43680 Gm7940-201ENSMUST00000218195 769 ntBASIC11.07□□□□□ -0.64
Sox18P43680 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.07□□□□□ -0.64
Sox18P43680 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox18P43680 AC102352.1-201ENSMUST00000224187 582 ntBASIC11.07□□□□□ -0.64
Sox18P43680 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.07□□□□□ -0.64
Sox18P43680 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.07□□□□□ -0.64
Sox18P43680 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sox18P43680 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Sox18P43680 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox18P43680 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Sox18P43680 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sox18P43680 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox18P43680 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox18P43680 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.06□□□□□ -0.64
Sox18P43680 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Gm24279-201ENSMUST00000104236 131 ntBASIC11.06□□□□□ -0.64
Sox18P43680 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms