Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC16.41■□□□□ 0.22
Chd1P40201 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Gm34780-201ENSMUST00000193896 949 ntBASIC16.41■□□□□ 0.22
Chd1P40201 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC16.41■□□□□ 0.22
Chd1P40201 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chd1P40201 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC16.41■□□□□ 0.22
Chd1P40201 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd1P40201 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC16.4■□□□□ 0.22
Chd1P40201 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC16.4■□□□□ 0.22
Chd1P40201 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC16.4■□□□□ 0.22
Chd1P40201 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC16.4■□□□□ 0.22
Chd1P40201 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd1P40201 Gm16410-201ENSMUST00000094550 774 ntBASIC16.4■□□□□ 0.22
Chd1P40201 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd1P40201 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd1P40201 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC16.4■□□□□ 0.22
Chd1P40201 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd1P40201 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd1P40201 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chd1P40201 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd1P40201 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC16.39■□□□□ 0.21
Chd1P40201 Gm11191-201ENSMUST00000117231 610 ntBASIC16.39■□□□□ 0.21
Chd1P40201 Mir6909-201ENSMUST00000184212 62 ntBASIC16.39■□□□□ 0.21
Chd1P40201 Gm27383-201ENSMUST00000184418 361 ntBASIC16.39■□□□□ 0.21
Chd1P40201 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC16.39■□□□□ 0.21
Chd1P40201 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd1P40201 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Gm7997-201ENSMUST00000210546 980 ntBASIC16.39■□□□□ 0.21
Chd1P40201 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd1P40201 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd1P40201 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd1P40201 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Chd1P40201 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Gm43522-201ENSMUST00000196697 1922 ntBASIC16.39■□□□□ 0.21
Chd1P40201 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC16.39■□□□□ 0.21
Chd1P40201 AC130671.3-201ENSMUST00000227393 1897 ntBASIC16.39■□□□□ 0.21
Chd1P40201 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Chd1P40201 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.39■□□□□ 0.21
Chd1P40201 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Chd1P40201 Rbm4-201ENSMUST00000164209 801 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Gm5960-201ENSMUST00000188483 406 ntBASIC16.39■□□□□ 0.21
Chd1P40201 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC16.39■□□□□ 0.21
Chd1P40201 Gm18623-201ENSMUST00000219860 953 ntBASIC16.39■□□□□ 0.21
Chd1P40201 AC120406.1-201ENSMUST00000220362 482 ntBASIC16.39■□□□□ 0.21
Chd1P40201 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Chd1P40201 AC122356.2-201ENSMUST00000226962 820 ntBASIC16.39■□□□□ 0.21
Chd1P40201 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Chd1P40201 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Chd1P40201 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Chd1P40201 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd1P40201 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1P40201 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1P40201 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1P40201 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1P40201 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Chd1P40201 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1P40201 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1P40201 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd1P40201 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd1P40201 AC156031.2-201ENSMUST00000213107 3310 ntBASIC16.38■□□□□ 0.21
Chd1P40201 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC16.38■□□□□ 0.21
Chd1P40201 Gm7251-201ENSMUST00000182661 1009 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms