Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.24□□□□□ -0.93
Cdkn1aP39689 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.24□□□□□ -0.93
Cdkn1aP39689 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Gm9369-201ENSMUST00000196009 733 ntBASIC9.24□□□□□ -0.93
Cdkn1aP39689 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.24□□□□□ -0.93
Cdkn1aP39689 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Gm18514-201ENSMUST00000218980 436 ntBASIC9.24□□□□□ -0.93
Cdkn1aP39689 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 CT030653.1-201ENSMUST00000224382 1279 ntBASIC9.24□□□□□ -0.93
Cdkn1aP39689 AC154184.3-201ENSMUST00000225620 1090 ntBASIC9.24□□□□□ -0.93
Cdkn1aP39689 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.24□□□□□ -0.93
Cdkn1aP39689 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.24□□□□□ -0.93
Cdkn1aP39689 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdkn1aP39689 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm11628-201ENSMUST00000117568 171 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm9673-201ENSMUST00000119287 781 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm12791-201ENSMUST00000120788 655 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm22877-201ENSMUST00000175451 105 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm28833-201ENSMUST00000189671 559 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm18059-201ENSMUST00000208073 580 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdkn1aP39689 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Cdkn1aP39689 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.23□□□□□ -0.93
Cdkn1aP39689 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms