Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm25872-201ENSMUST00000177784 100 ntBASIC10.37□□□□□ -0.75
Sftpa1P35242 Gm8756-201ENSMUST00000183250 929 ntBASIC10.37□□□□□ -0.75
Sftpa1P35242 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.37□□□□□ -0.75
Sftpa1P35242 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.37□□□□□ -0.75
Sftpa1P35242 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.37□□□□□ -0.75
Sftpa1P35242 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.37□□□□□ -0.75
Sftpa1P35242 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sftpa1P35242 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Sftpa1P35242 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.37□□□□□ -0.75
Sftpa1P35242 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sftpa1P35242 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sftpa1P35242 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sftpa1P35242 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sftpa1P35242 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sftpa1P35242 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm15617-201ENSMUST00000118973 771 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm26313-201ENSMUST00000157770 308 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm19246-201ENSMUST00000173599 255 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm18733-202ENSMUST00000174447 401 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Snord55-201ENSMUST00000174939 79 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm24312-201ENSMUST00000178677 119 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sftpa1P35242 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm42599-201ENSMUST00000201308 469 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.36□□□□□ -0.75
Sftpa1P35242 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.36□□□□□ -0.75
Sftpa1P35242 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sftpa1P35242 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sftpa1P35242 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms