Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Hoxc5P32043 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Hoxc5P32043 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm13809-201ENSMUST00000117921 597 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm12217-201ENSMUST00000118858 696 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.37□□□□□ -0.75
Hoxc5P32043 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm12407-201ENSMUST00000180219 324 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm18056-201ENSMUST00000207670 568 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm18061-201ENSMUST00000208350 562 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm18063-201ENSMUST00000208529 568 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm18052-201ENSMUST00000208750 559 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm45856-201ENSMUST00000212752 416 ntBASIC10.37□□□□□ -0.75
Hoxc5P32043 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hoxc5P32043 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxc5P32043 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hoxc5P32043 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Gm25148-201ENSMUST00000104611 123 ntBASIC10.36□□□□□ -0.75
Hoxc5P32043 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxc5P32043 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms