Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.55□□□□□ -0.56
Nfkb1P25799 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Nfkb1P25799 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nfkb1P25799 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.55□□□□□ -0.56
Nfkb1P25799 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nfkb1P25799 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm13284-201ENSMUST00000121020 547 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm8723-201ENSMUST00000166076 820 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm8701-201ENSMUST00000169259 874 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm18776-201ENSMUST00000188833 654 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm28833-201ENSMUST00000189671 559 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm9369-201ENSMUST00000196009 733 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm9353-201ENSMUST00000200472 604 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.54□□□□□ -0.56
Nfkb1P25799 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nfkb1P25799 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Thoc7-209ENSMUST00000225325 765 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nfkb1P25799 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.54□□□□□ -0.56
Nfkb1P25799 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nfkb1P25799 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms