Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col8a2P25318 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Col8a2P25318 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Col8a2P25318 Gm14270-201ENSMUST00000118388 846 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.32□□□□□ -0.92
Col8a2P25318 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Gm17192-201ENSMUST00000169031 511 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC9.32□□□□□ -0.92
Col8a2P25318 Snord55-201ENSMUST00000174939 79 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Gm9884-201ENSMUST00000194343 1222 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Gm19166-201ENSMUST00000196041 1063 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Gm43249-201ENSMUST00000200464 458 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Col8a2P25318 Gm45120-201ENSMUST00000208880 408 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Id2-203ENSMUST00000222667 958 ntBASIC9.32□□□□□ -0.92
Col8a2P25318 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Col8a2P25318 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Col8a2P25318 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col8a2P25318 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Col8a2P25318 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Col8a2P25318 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.31□□□□□ -0.92
Col8a2P25318 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Col8a2P25318 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Col8a2P25318 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Gm14807-201ENSMUST00000116640 983 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm12663-201ENSMUST00000118481 958 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.31□□□□□ -0.92
Col8a2P25318 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC9.31□□□□□ -0.92
Col8a2P25318 Gm16030-201ENSMUST00000159098 603 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms