Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Gm12217-201ENSMUST00000118858 696 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.09□□□□□ -0.95
Cdx1P18111 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.09□□□□□ -0.95
Cdx1P18111 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.09□□□□□ -0.95
Cdx1P18111 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.09□□□□□ -0.95
Cdx1P18111 Gm43378-201ENSMUST00000199336 582 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Gm6439-201ENSMUST00000199849 862 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Gm42997-202ENSMUST00000200321 985 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.09□□□□□ -0.95
Cdx1P18111 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Gm8385-201ENSMUST00000058999 643 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Cdx1P18111 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Cdx1P18111 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Cdx1P18111 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.09□□□□□ -0.95
Cdx1P18111 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx1P18111 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.96
Cdx1P18111 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.09□□□□□ -0.96
Cdx1P18111 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
Cdx1P18111 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm7340-201ENSMUST00000119729 2752 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Cdx1P18111 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm13296-201ENSMUST00000117854 997 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Gm13996-201ENSMUST00000118456 430 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 B9d1os-201ENSMUST00000137010 674 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.08□□□□□ -0.96
Cdx1P18111 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.08□□□□□ -0.96
Cdx1P18111 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.08□□□□□ -0.96
Cdx1P18111 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.08□□□□□ -0.96
Cdx1P18111 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Mir339-201ENSMUST00000083659 96 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm43817-201ENSMUST00000196459 2262 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Cdx1P18111 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cdx1P18111 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm37759-201ENSMUST00000194155 3246 ntBASIC9.08□□□□□ -0.96
Cdx1P18111 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cdx1P18111 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms