Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.2□□□□□ -0.46
Chmp6P0C0A3 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm12029-201ENSMUST00000120073 832 ntBASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm11246-201ENSMUST00000120880 345 ntBASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm3329-201ENSMUST00000159873 556 ntBASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm44126-201ENSMUST00000204831 514 ntBASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm17825-201ENSMUST00000206836 794 ntBASIC12.2□□□□□ -0.46
Chmp6P0C0A3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm25076-201ENSMUST00000104098 132 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm12419-201ENSMUST00000116649 636 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm15615-201ENSMUST00000118876 198 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm3508-201ENSMUST00000186012 792 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm23105-201ENSMUST00000083719 134 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.19□□□□□ -0.46
Chmp6P0C0A3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp6P0C0A3 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms