Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.44□□□□□ -0.1
Hoxc9P09633 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc9P09633 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.44□□□□□ -0.1
Hoxc9P09633 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc9P09633 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Gm24279-201ENSMUST00000104236 131 ntBASIC14.44□□□□□ -0.1
Hoxc9P09633 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC14.44□□□□□ -0.1
Hoxc9P09633 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.44□□□□□ -0.1
Hoxc9P09633 Gm8234-201ENSMUST00000198523 1107 ntBASIC14.44□□□□□ -0.1
Hoxc9P09633 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.44□□□□□ -0.1
Hoxc9P09633 Nsmce2-203ENSMUST00000227173 1122 ntBASIC14.44□□□□□ -0.1
Hoxc9P09633 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc9P09633 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc9P09633 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.44□□□□□ -0.1
Hoxc9P09633 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Hoxc9P09633 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc9P09633 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxc9P09633 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Hoxc9P09633 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc9P09633 Gm5764-201ENSMUST00000118817 885 ntBASIC14.43□□□□□ -0.1
Hoxc9P09633 Gm8019-201ENSMUST00000119317 587 ntBASIC14.43□□□□□ -0.1
Hoxc9P09633 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Gng5-ps-201ENSMUST00000120931 205 ntBASIC14.43□□□□□ -0.1
Hoxc9P09633 Gm7928-201ENSMUST00000181249 701 ntBASIC14.43□□□□□ -0.1
Hoxc9P09633 Gm28671-201ENSMUST00000187036 692 ntBASIC14.43□□□□□ -0.1
Hoxc9P09633 Gm40414-201ENSMUST00000197608 481 ntBASIC14.43□□□□□ -0.1
Hoxc9P09633 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc9P09633 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc9P09633 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Gm7964-201ENSMUST00000051522 1378 ntBASIC14.43□□□□□ -0.1
Hoxc9P09633 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxc9P09633 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc9P09633 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc9P09633 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Hoxc9P09633 Gm11919-201ENSMUST00000117609 721 ntBASIC14.42□□□□□ -0.1
Hoxc9P09633 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Gm5526-201ENSMUST00000153604 423 ntBASIC14.42□□□□□ -0.1
Hoxc9P09633 Cd9-ps-201ENSMUST00000174687 650 ntBASIC14.42□□□□□ -0.1
Hoxc9P09633 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxc9P09633 Gm8601-201ENSMUST00000182096 909 ntBASIC14.42□□□□□ -0.1
Hoxc9P09633 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC14.42□□□□□ -0.1
Hoxc9P09633 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC14.42□□□□□ -0.1
Hoxc9P09633 Wbp1-209ENSMUST00000205023 716 ntBASIC14.42□□□□□ -0.1
Hoxc9P09633 Gm7183-201ENSMUST00000213870 1005 ntBASIC14.42□□□□□ -0.1
Hoxc9P09633 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.42□□□□□ -0.1
Hoxc9P09633 Gm6564-201ENSMUST00000075377 619 ntBASIC14.42□□□□□ -0.1
Hoxc9P09633 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hoxc9P09633 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc9P09633 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxc9P09633 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc9P09633 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxc9P09633 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxc9P09633 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxc9P09633 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms