Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm14942-201ENSMUST00000119642 336 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm4917-201ENSMUST00000121452 650 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Mir7070-201ENSMUST00000183657 86 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm3551-201ENSMUST00000190750 664 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm44323-201ENSMUST00000198689 129 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm43916-201ENSMUST00000205062 967 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Igh-VJ558P01758 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 B9d1os-201ENSMUST00000137010 674 ntBASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Gm20426-201ENSMUST00000173657 440 ntBASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Gm10731-201ENSMUST00000181171 448 ntBASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 AC155637.1-201ENSMUST00000218560 636 ntBASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Gm25125-201ENSMUST00000083340 136 ntBASIC9.65□□□□□ -0.86
Igh-VJ558P01758 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Igh-VJ558P01758 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Igh-VJ558P01758 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Igh-VJ558P01758 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms