Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CopeO89079 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
CopeO89079 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.51□□□□□ -0.57
CopeO89079 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.51□□□□□ -0.57
CopeO89079 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Gm24749-201ENSMUST00000157838 343 ntBASIC11.51□□□□□ -0.57
CopeO89079 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
CopeO89079 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.51□□□□□ -0.57
CopeO89079 Gm5302-201ENSMUST00000202130 796 ntBASIC11.51□□□□□ -0.57
CopeO89079 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.51□□□□□ -0.57
CopeO89079 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CopeO89079 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.51□□□□□ -0.57
CopeO89079 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.51□□□□□ -0.57
CopeO89079 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CopeO89079 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
CopeO89079 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
CopeO89079 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CopeO89079 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.51□□□□□ -0.57
CopeO89079 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.51□□□□□ -0.57
CopeO89079 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.5□□□□□ -0.57
CopeO89079 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CopeO89079 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.5□□□□□ -0.57
CopeO89079 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Snord17-201ENSMUST00000104526 238 ntBASIC11.5□□□□□ -0.57
CopeO89079 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.5□□□□□ -0.57
CopeO89079 Gm13916-201ENSMUST00000117368 628 ntBASIC11.5□□□□□ -0.57
CopeO89079 Gm12196-201ENSMUST00000120954 262 ntBASIC11.5□□□□□ -0.57
CopeO89079 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CopeO89079 Gm18734-201ENSMUST00000172937 808 ntBASIC11.5□□□□□ -0.57
CopeO89079 Gm25890-201ENSMUST00000177643 165 ntBASIC11.5□□□□□ -0.57
CopeO89079 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.5□□□□□ -0.57
CopeO89079 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.5□□□□□ -0.57
CopeO89079 Gm22614-201ENSMUST00000178300 165 ntBASIC11.5□□□□□ -0.57
CopeO89079 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CopeO89079 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.5□□□□□ -0.57
CopeO89079 Gm43758-201ENSMUST00000199500 367 ntBASIC11.5□□□□□ -0.57
CopeO89079 Gm44262-201ENSMUST00000204969 372 ntBASIC11.5□□□□□ -0.57
CopeO89079 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CopeO89079 Gm5996-201ENSMUST00000211110 718 ntBASIC11.5□□□□□ -0.57
CopeO89079 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.5□□□□□ -0.57
CopeO89079 Gm22042-201ENSMUST00000082989 165 ntBASIC11.5□□□□□ -0.57
CopeO89079 Gm26110-201ENSMUST00000083971 165 ntBASIC11.5□□□□□ -0.57
CopeO89079 Gm10288-201ENSMUST00000084614 537 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms