Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.86□□□□□ -0.51
Itgb3O54890 Snord55-201ENSMUST00000174939 79 ntBASIC11.86□□□□□ -0.51
Itgb3O54890 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.86□□□□□ -0.51
Itgb3O54890 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.86□□□□□ -0.51
Itgb3O54890 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.86□□□□□ -0.51
Itgb3O54890 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Itgb3O54890 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm25580-201ENSMUST00000083409 327 ntBASIC11.86□□□□□ -0.51
Itgb3O54890 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Itgb3O54890 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.86□□□□□ -0.51
Itgb3O54890 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.86□□□□□ -0.51
Itgb3O54890 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.85□□□□□ -0.51
Itgb3O54890 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.85□□□□□ -0.51
Itgb3O54890 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Itgb3O54890 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Itgb3O54890 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Gm12986-201ENSMUST00000119037 967 ntBASIC11.85□□□□□ -0.51
Itgb3O54890 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.85□□□□□ -0.51
Itgb3O54890 Gm9673-201ENSMUST00000119287 781 ntBASIC11.85□□□□□ -0.51
Itgb3O54890 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.85□□□□□ -0.51
Itgb3O54890 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.85□□□□□ -0.51
Itgb3O54890 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.85□□□□□ -0.51
Itgb3O54890 Gm9081-201ENSMUST00000182346 991 ntBASIC11.85□□□□□ -0.51
Itgb3O54890 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Gm16380-201ENSMUST00000077997 478 ntBASIC11.85□□□□□ -0.51
Itgb3O54890 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.85□□□□□ -0.51
Itgb3O54890 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Itgb3O54890 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Itgb3O54890 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Itgb3O54890 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.85□□□□□ -0.51
Itgb3O54890 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.85□□□□□ -0.51
Itgb3O54890 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.85□□□□□ -0.51
Itgb3O54890 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Itgb3O54890 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Itgb3O54890 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Itgb3O54890 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms