Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm11663-201ENSMUST00000117888 290 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm24074-201ENSMUST00000158178 260 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm8815-201ENSMUST00000173809 620 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm16505-201ENSMUST00000179981 232 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm27627-201ENSMUST00000183644 150 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm27530-201ENSMUST00000184096 98 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Mir7677-201ENSMUST00000184226 67 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm18038-201ENSMUST00000197900 485 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Snord17-201ENSMUST00000104526 238 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm25148-201ENSMUST00000104611 123 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm14130-201ENSMUST00000118417 987 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm15374-201ENSMUST00000119313 844 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm8566-201ENSMUST00000120174 465 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm26083-201ENSMUST00000157904 193 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm17376-201ENSMUST00000166016 84 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm29615-201ENSMUST00000185371 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm28224-201ENSMUST00000186078 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm29001-201ENSMUST00000186177 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm28292-201ENSMUST00000186593 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm28101-201ENSMUST00000187608 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm29076-201ENSMUST00000187689 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm28302-201ENSMUST00000187931 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm28646-201ENSMUST00000188220 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm28205-201ENSMUST00000189177 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm29032-201ENSMUST00000189797 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm28695-201ENSMUST00000190300 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm37448-201ENSMUST00000192795 697 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm32111-201ENSMUST00000207689 846 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Pcdh1F7BJK1 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms