Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Gm4654-201ENSMUST00000183305 982 ntBASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Trav11n-201ENSMUST00000200113 343 ntBASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usf3B2RUQ2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Btrc-209ENSMUST00000224478 2194 ntBASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm9507-202ENSMUST00000180157 654 ntBASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm8531-201ENSMUST00000188319 893 ntBASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm42433-201ENSMUST00000196806 940 ntBASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.38□□□□□ -0.91
Usf3B2RUQ2 Gm11244-201ENSMUST00000121243 237 ntBASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm42511-201ENSMUST00000196160 234 ntBASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Olfr692-202ENSMUST00000217827 1126 ntBASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms