Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm15617-201ENSMUST00000118973 771 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm12266-201ENSMUST00000120311 962 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm8199-201ENSMUST00000121323 823 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Olfml3-204ENSMUST00000169286 874 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm2383-201ENSMUST00000181461 807 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm5996-201ENSMUST00000211110 718 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm45856-201ENSMUST00000212752 416 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccl28Q9JIL2 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.02□□□□□ -0.96
Ccl28Q9JIL2 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Ccl28Q9JIL2 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ccl28Q9JIL2 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gm24891-201ENSMUST00000104391 136 ntBASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gm15515-201ENSMUST00000117827 822 ntBASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gm15329-201ENSMUST00000121408 155 ntBASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Gm17040-202ENSMUST00000170597 889 ntBASIC9.02□□□□□ -0.97
Ccl28Q9JIL2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms