Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.73□□□□□ -0.69
Ube4bQ9ES00 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 AC158779.1-201ENSMUST00000228912 3861 ntBASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ube4bQ9ES00 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm37003-201ENSMUST00000194702 2827 ntBASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm8062-201ENSMUST00000139696 444 ntBASIC10.72□□□□□ -0.69
Ube4bQ9ES00 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm37489-201ENSMUST00000191883 159 ntBASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm43118-201ENSMUST00000199149 775 ntBASIC10.72□□□□□ -0.69
Ube4bQ9ES00 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ube4bQ9ES00 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 AC121574.1-201ENSMUST00000228770 3132 ntBASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Gm4986-201ENSMUST00000119731 549 ntBASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Rprl1-201ENSMUST00000158050 327 ntBASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Gm17420-201ENSMUST00000164753 153 ntBASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ube4bQ9ES00 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms