Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Gm19208-201ENSMUST00000213861 912 ntBASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf111Q99ML9 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.67
Rnf111Q99ML9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf111Q99ML9 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf111Q99ML9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf111Q99ML9 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf111Q99ML9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf111Q99ML9 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
Rnf111Q99ML9 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Gm13263-201ENSMUST00000121271 838 ntBASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Gm38151-201ENSMUST00000195085 289 ntBASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Gm6867-201ENSMUST00000219165 425 ntBASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.89□□□□□ -0.67
Rnf111Q99ML9 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm13916-201ENSMUST00000117368 628 ntBASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm7851-201ENSMUST00000117574 323 ntBASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm14071-201ENSMUST00000117817 509 ntBASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm12579-201ENSMUST00000118040 783 ntBASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm25732-201ENSMUST00000175168 60 ntBASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf111Q99ML9 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms