Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm5529-201ENSMUST00000165691 891 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm8756-201ENSMUST00000183250 929 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm37436-201ENSMUST00000193842 1085 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm6331-201ENSMUST00000217890 450 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 AC155266.1-201ENSMUST00000220762 904 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nkx6-1Q99MA9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gm23595-201ENSMUST00000104306 130 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gm12418-201ENSMUST00000118116 942 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gm24943-201ENSMUST00000158329 433 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gm6644-201ENSMUST00000186507 951 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gm30946-201ENSMUST00000198288 724 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gm18010-201ENSMUST00000203553 202 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gm18515-201ENSMUST00000219755 797 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx6-1Q99MA9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms