Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm11836-201ENSMUST00000121022 441 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm37981-201ENSMUST00000194280 535 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm9645-201ENSMUST00000197131 792 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm5451-201ENSMUST00000080545 579 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdhga4Q91XY4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Gm12247-201ENSMUST00000117585 670 ntBASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Gm14460-201ENSMUST00000121511 639 ntBASIC11.09□□□□□ -0.63
Pcdhga4Q91XY4 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms