Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm25148-201ENSMUST00000104611 123 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gm8302-201ENSMUST00000119217 852 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gm4726-201ENSMUST00000135604 736 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gm6019-201ENSMUST00000148369 736 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gm17831-201ENSMUST00000205579 900 ntBASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim29Q8R2Q0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm15374-201ENSMUST00000119313 844 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm21092-201ENSMUST00000178995 955 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm42997-202ENSMUST00000200321 985 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm9555-201ENSMUST00000200908 583 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm44315-201ENSMUST00000203041 219 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm5451-201ENSMUST00000080545 579 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
Trim29Q8R2Q0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Gm12419-201ENSMUST00000116649 636 ntBASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Gm14263-201ENSMUST00000117955 746 ntBASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Gm15573-201ENSMUST00000119487 540 ntBASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Mir7051-201ENSMUST00000184167 73 ntBASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms