Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mir3060-201ENSMUST00000175339 83 ntBASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Gm37009-201ENSMUST00000193297 361 ntBASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Gm6038-201ENSMUST00000154310 948 ntBASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Mir3091-201ENSMUST00000175086 76 ntBASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Gm5424-201ENSMUST00000053865 1240 ntBASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx54Q8K4L0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm29101-201ENSMUST00000188329 1471 ntBASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm14997-201ENSMUST00000119232 636 ntBASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm18124-201ENSMUST00000210695 706 ntBASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Ddx54Q8K4L0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Gm13777-201ENSMUST00000118208 345 ntBASIC14.64□□□□□ -0.07
Ddx54Q8K4L0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms