Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc87Q8CDL9 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Gm15515-201ENSMUST00000117827 822 ntBASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Gm11573-201ENSMUST00000119956 394 ntBASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc87Q8CDL9 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm14058-201ENSMUST00000116082 735 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm11509-201ENSMUST00000117358 325 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm12857-201ENSMUST00000117678 592 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm15782-201ENSMUST00000121073 445 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm22902-201ENSMUST00000158488 302 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm37597-201ENSMUST00000191853 382 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Nsd1-205ENSMUST00000224693 852 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc87Q8CDL9 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc87Q8CDL9 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc87Q8CDL9 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc87Q8CDL9 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc87Q8CDL9 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms