Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Gm14276-201ENSMUST00000117941 720 ntBASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 AC108416.3-201ENSMUST00000226148 557 ntBASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1Q8CCS6 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Gm5696-201ENSMUST00000189850 552 ntBASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Gm6439-201ENSMUST00000199849 862 ntBASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1Q8CCS6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 AC140393.4-201ENSMUST00000226994 765 ntBASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 AC161172.1-201ENSMUST00000227801 486 ntBASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Gm45719-201ENSMUST00000207954 1662 ntBASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC17.06■□□□□ 0.32
Pabpn1Q8CCS6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Gm44547-201ENSMUST00000207793 1446 ntBASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Gm25561-201ENSMUST00000104607 125 ntBASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
Pabpn1Q8CCS6 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms