Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm13935-201ENSMUST00000121859 798 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm24074-201ENSMUST00000158178 260 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm16570-201ENSMUST00000161951 436 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Mir6979-201ENSMUST00000183927 56 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Gm14592-201ENSMUST00000117201 560 ntBASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Gm14585-201ENSMUST00000120713 634 ntBASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Gm10731-201ENSMUST00000181171 448 ntBASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Gm37458-201ENSMUST00000194055 410 ntBASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trub1Q8C0D0 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm14942-201ENSMUST00000119642 336 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm15881-201ENSMUST00000148792 942 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm3551-201ENSMUST00000190750 664 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms