Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sh3rf2Q8BZT2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm12663-201ENSMUST00000118481 958 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm12986-201ENSMUST00000119037 967 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm3828-201ENSMUST00000121817 257 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm17221-201ENSMUST00000163909 481 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm17073-201ENSMUST00000168069 556 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm6390-201ENSMUST00000215034 589 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Capsl-202ENSMUST00000226688 739 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm26670-202ENSMUST00000226862 340 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sh3rf2Q8BZT2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gm25562-201ENSMUST00000104608 133 ntBASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gm8181-201ENSMUST00000062242 669 ntBASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms