Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Mir7011-201ENSMUST00000183768 73 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm5311-201ENSMUST00000203518 709 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm14153-201ENSMUST00000119923 1139 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm44124-201ENSMUST00000204159 472 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm10238-201ENSMUST00000089689 408 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm5873-201ENSMUST00000177157 1066 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm7539-201ENSMUST00000189789 630 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Gm18065-201ENSMUST00000221395 526 ntBASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Smg1Q8BKX6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Olfml3-204ENSMUST00000169286 874 ntBASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Gm19246-201ENSMUST00000173599 255 ntBASIC9.18□□□□□ -0.94
Smg1Q8BKX6 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Gm18862-201ENSMUST00000204643 933 ntBASIC9.18□□□□□ -0.94
Smg1Q8BKX6 AC155300.1-201ENSMUST00000219134 480 ntBASIC9.18□□□□□ -0.94
Smg1Q8BKX6 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Gm13215-201ENSMUST00000117559 472 ntBASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Gm8661-201ENSMUST00000118688 992 ntBASIC9.18□□□□□ -0.94
Smg1Q8BKX6 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smg1Q8BKX6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms