Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Gm15374-201ENSMUST00000119313 844 ntBASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Gm15968-201ENSMUST00000119342 1168 ntBASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Gm22379-201ENSMUST00000157480 131 ntBASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Gm28923-201ENSMUST00000187755 322 ntBASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Gm43037-201ENSMUST00000196808 250 ntBASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh19Q80TF3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm29067-201ENSMUST00000190821 470 ntBASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm44323-201ENSMUST00000198689 129 ntBASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm42867-201ENSMUST00000202995 469 ntBASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm45359-201ENSMUST00000210635 427 ntBASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm30671-201ENSMUST00000214898 318 ntBASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Gm5805-201ENSMUST00000072779 456 ntBASIC11.06□□□□□ -0.64
Pcdh19Q80TF3 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms