Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm23439-201ENSMUST00000104292 132 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm5526-201ENSMUST00000153604 423 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm8756-201ENSMUST00000183250 929 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm7445-201ENSMUST00000192115 340 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm43002-201ENSMUST00000200310 155 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Gm33080-201ENSMUST00000205429 172 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 AC107752.1-201ENSMUST00000219362 469 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 AC154213.1-201ENSMUST00000228234 583 ntBASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx55Q6ZPL9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Gm14034-201ENSMUST00000120147 551 ntBASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Gm5808-201ENSMUST00000178090 357 ntBASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Gm7928-201ENSMUST00000181249 701 ntBASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx55Q6ZPL9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx55Q6ZPL9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms