Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Gm23061-201ENSMUST00000102348 116 ntBASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Gm16505-201ENSMUST00000179981 232 ntBASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 AY702102-202ENSMUST00000194651 1173 ntBASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Scaf4Q6PFF0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Scaf4Q6PFF0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Scaf4Q6PFF0 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scaf4Q6PFF0 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scaf4Q6PFF0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Scaf4Q6PFF0 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm15374-201ENSMUST00000119313 844 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm13665-201ENSMUST00000120830 528 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Mir8109-201ENSMUST00000184375 117 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm27441-201ENSMUST00000185000 105 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm28071-201ENSMUST00000190355 478 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm44967-201ENSMUST00000207047 631 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm7399-201ENSMUST00000032395 858 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm10478-201ENSMUST00000084451 396 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Scaf4Q6PFF0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms