Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 BC080696-201ENSMUST00000202858 1218 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm10233-201ENSMUST00000089275 628 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup98Q6PFD9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm15707-201ENSMUST00000118804 996 ntBASIC13□□□□□ -0.33
Nup98Q6PFD9 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm43811-201ENSMUST00000202862 695 ntBASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm44953-201ENSMUST00000208745 1286 ntBASIC13□□□□□ -0.33
Nup98Q6PFD9 AC154585.1-201ENSMUST00000218917 997 ntBASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm8796-201ENSMUST00000219122 936 ntBASIC13□□□□□ -0.33
Nup98Q6PFD9 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Nup98Q6PFD9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13□□□□□ -0.33
Nup98Q6PFD9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nup98Q6PFD9 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm6768-201ENSMUST00000022467 1878 ntBASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13□□□□□ -0.33
Nup98Q6PFD9 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup98Q6PFD9 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC13□□□□□ -0.33
Nup98Q6PFD9 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13□□□□□ -0.33
Nup98Q6PFD9 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Mir1941-201ENSMUST00000157834 83 ntBASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gm3527-201ENSMUST00000198905 460 ntBASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gm11235-201ENSMUST00000117763 333 ntBASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.99□□□□□ -0.33
Nup98Q6PFD9 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.99□□□□□ -0.33
Nup98Q6PFD9 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup98Q6PFD9 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.98□□□□□ -0.33
Nup98Q6PFD9 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms