Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sh3rf1Q69ZI1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm26286-201ENSMUST00000104166 134 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm13809-201ENSMUST00000117921 597 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm11511-201ENSMUST00000118146 540 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm14724-201ENSMUST00000118400 537 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf1Q69ZI1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf1Q69ZI1 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms