Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rc3h1Q4VGL6 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm22877-201ENSMUST00000175451 105 ntBASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm28833-201ENSMUST00000189671 559 ntBASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm37965-201ENSMUST00000195304 1362 ntBASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rc3h1Q4VGL6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Mir453-201ENSMUST00000104732 82 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm12663-201ENSMUST00000118481 958 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Snord55-201ENSMUST00000174939 79 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm18595-201ENSMUST00000175736 1068 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm26976-201ENSMUST00000182929 908 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm37629-201ENSMUST00000193635 1050 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm38170-201ENSMUST00000195404 816 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm44814-201ENSMUST00000207018 434 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Gm8420-201ENSMUST00000097103 598 ntBASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rc3h1Q4VGL6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms