Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm22846-201ENSMUST00000157706 270 ntBASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm27627-201ENSMUST00000183644 150 ntBASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.89□□□□□ -0.51
Trim43aQ3TL54 AY036118-201ENSMUST00000200021 923 ntBASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm42867-201ENSMUST00000202995 469 ntBASIC11.89□□□□□ -0.51
Trim43aQ3TL54 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm18730-201ENSMUST00000218038 343 ntBASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gm26448-201ENSMUST00000082446 203 ntBASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Olfml3-204ENSMUST00000169286 874 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Mir7070-201ENSMUST00000183657 86 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Gm37301-201ENSMUST00000195412 568 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Gm5714-201ENSMUST00000197343 566 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Gm44262-201ENSMUST00000204969 372 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Gm45856-201ENSMUST00000212752 416 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 AA474408-201ENSMUST00000098110 3339 ntBASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trim43aQ3TL54 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms