Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm23689-201ENSMUST00000180354 110 ntBASIC9.17□□□□□ -0.94
Trim63Q38HM4 Gm27359-201ENSMUST00000184153 110 ntBASIC9.17□□□□□ -0.94
Trim63Q38HM4 Gm27785-201ENSMUST00000184268 110 ntBASIC9.17□□□□□ -0.94
Trim63Q38HM4 Gm27466-201ENSMUST00000184396 110 ntBASIC9.17□□□□□ -0.94
Trim63Q38HM4 Gm27703-201ENSMUST00000184836 110 ntBASIC9.17□□□□□ -0.94
Trim63Q38HM4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Dag1-202ENSMUST00000166905 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Gm42633-201ENSMUST00000198853 2764 ntBASIC9.17□□□□□ -0.94
Trim63Q38HM4 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Klf8-201ENSMUST00000039545 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Tbc1d24-214ENSMUST00000201960 4305 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim63Q38HM4 Gm37902-201ENSMUST00000192839 1683 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Stam2-201ENSMUST00000102759 4717 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Rsrc1-201ENSMUST00000046542 3062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Patj-205ENSMUST00000107030 2104 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Ano1-203ENSMUST00000121758 4552 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm15487-201ENSMUST00000122373 465 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm5706-201ENSMUST00000181525 993 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm27533-201ENSMUST00000183800 152 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 AC159819.3-201ENSMUST00000216940 1837 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm20682-201ENSMUST00000176552 3517 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm42879-201ENSMUST00000198656 2214 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Zfp536-206ENSMUST00000176205 4372 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 2410002F23Rik-202ENSMUST00000071296 4201 ntAPPRIS P2 TSL 2 BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim63Q38HM4 Gm37367-201ENSMUST00000191771 2602 ntBASIC9.16□□□□□ -0.94
Trim63Q38HM4 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim63Q38HM4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 171.6 ms