Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC8.71□□□□□ -1.01
Cdx4Q07424 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Cdx4Q07424 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Cdx4Q07424 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Gm11960-201ENSMUST00000122068 925 ntBASIC8.71□□□□□ -1.02
Cdx4Q07424 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC8.71□□□□□ -1.02
Cdx4Q07424 Mir8093-201ENSMUST00000185043 137 ntBASIC8.71□□□□□ -1.02
Cdx4Q07424 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Gm43622-201ENSMUST00000200140 2019 ntBASIC8.71□□□□□ -1.02
Cdx4Q07424 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Cdx4Q07424 Gm36957-201ENSMUST00000192982 2824 ntBASIC8.71□□□□□ -1.02
Cdx4Q07424 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx4Q07424 Gm37600-201ENSMUST00000193764 3292 ntBASIC8.71□□□□□ -1.02
Cdx4Q07424 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm7841-201ENSMUST00000122108 1629 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm3836-201ENSMUST00000211377 1613 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm11500-201ENSMUST00000118237 601 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm11783-201ENSMUST00000119549 885 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm11246-201ENSMUST00000120880 345 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm22144-201ENSMUST00000157402 102 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC8.7□□□□□ -1.02
Cdx4Q07424 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm17391-201ENSMUST00000171036 126 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm17831-201ENSMUST00000205579 900 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 CT485607.1-201ENSMUST00000216100 85 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm9785-201ENSMUST00000062642 1006 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms