Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
PrkcbP68404 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PrkcbP68404 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 Gm12986-201ENSMUST00000119037 967 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 Gm9673-201ENSMUST00000119287 781 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.12□□□□□ -0.47
PrkcbP68404 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.12□□□□□ -0.47
PrkcbP68404 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.12□□□□□ -0.47
PrkcbP68404 Snord55-201ENSMUST00000174939 79 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.12□□□□□ -0.47
PrkcbP68404 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.12□□□□□ -0.47
PrkcbP68404 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Gm16380-201ENSMUST00000077997 478 ntBASIC12.12□□□□□ -0.47
PrkcbP68404 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
PrkcbP68404 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
PrkcbP68404 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
PrkcbP68404 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PrkcbP68404 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PrkcbP68404 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkcbP68404 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.11□□□□□ -0.47
PrkcbP68404 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.11□□□□□ -0.47
PrkcbP68404 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.11□□□□□ -0.47
PrkcbP68404 Gm29155-201ENSMUST00000185910 269 ntBASIC12.11□□□□□ -0.47
PrkcbP68404 Gm43671-201ENSMUST00000200422 433 ntBASIC12.11□□□□□ -0.47
PrkcbP68404 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.11□□□□□ -0.47
PrkcbP68404 Gm18968-201ENSMUST00000221319 862 ntBASIC12.11□□□□□ -0.47
PrkcbP68404 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.11□□□□□ -0.47
PrkcbP68404 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PrkcbP68404 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkcbP68404 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
PrkcbP68404 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkcbP68404 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkcbP68404 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PrkcbP68404 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.1□□□□□ -0.47
PrkcbP68404 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkcbP68404 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkcbP68404 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkcbP68404 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkcbP68404 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkcbP68404 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkcbP68404 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms