Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm11511-201ENSMUST00000118146 540 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm12501-201ENSMUST00000119163 529 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm12196-201ENSMUST00000120954 262 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm25881-201ENSMUST00000157783 103 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm28686-201ENSMUST00000187404 609 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm44100-201ENSMUST00000204329 436 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm4157-201ENSMUST00000211647 679 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61a1P61620 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.9□□□□□ -0.82
Sec61a1P61620 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Sec61a1P61620 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a1P61620 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a1P61620 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Sec61a1P61620 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a1P61620 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a1P61620 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a1P61620 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Sec61a1P61620 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a1P61620 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a1P61620 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a1P61620 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a1P61620 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms