Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhbdl3P58873 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rhbdl3P58873 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhbdl3P58873 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.28□□□□□ -0.28
Rhbdl3P58873 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rhbdl3P58873 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.28□□□□□ -0.28
Rhbdl3P58873 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC13.28□□□□□ -0.28
Rhbdl3P58873 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rhbdl3P58873 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rhbdl3P58873 Gm11993-201ENSMUST00000121861 820 ntBASIC13.27□□□□□ -0.29
Rhbdl3P58873 Gm16547-201ENSMUST00000159474 293 ntBASIC13.27□□□□□ -0.29
Rhbdl3P58873 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.27□□□□□ -0.29
Rhbdl3P58873 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.27□□□□□ -0.29
Rhbdl3P58873 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Gm40879-201ENSMUST00000220759 612 ntBASIC13.27□□□□□ -0.29
Rhbdl3P58873 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Gm5449-201ENSMUST00000081132 357 ntBASIC13.27□□□□□ -0.29
Rhbdl3P58873 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.27□□□□□ -0.29
Rhbdl3P58873 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rhbdl3P58873 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.27□□□□□ -0.29
Rhbdl3P58873 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rhbdl3P58873 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm11475-201ENSMUST00000118482 476 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm25569-201ENSMUST00000157175 131 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm6677-201ENSMUST00000195100 441 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm7902-201ENSMUST00000198842 947 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm29763-201ENSMUST00000205306 616 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm44605-201ENSMUST00000206892 949 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 BC106175-202ENSMUST00000219344 1213 ntBASIC13.26□□□□□ -0.29
Rhbdl3P58873 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rhbdl3P58873 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.25□□□□□ -0.29
Rhbdl3P58873 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Gm12943-201ENSMUST00000119616 210 ntBASIC13.25□□□□□ -0.29
Rhbdl3P58873 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 Gm9507-202ENSMUST00000180157 654 ntBASIC13.25□□□□□ -0.29
Rhbdl3P58873 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rhbdl3P58873 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.25□□□□□ -0.29
Rhbdl3P58873 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms