Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.48□□□□□ -0.41
Tpm1P58771 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.48□□□□□ -0.41
Tpm1P58771 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.48□□□□□ -0.41
Tpm1P58771 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tpm1P58771 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.48□□□□□ -0.41
Tpm1P58771 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tpm1P58771 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Gm13296-201ENSMUST00000117854 997 ntBASIC12.48□□□□□ -0.41
Tpm1P58771 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.48□□□□□ -0.41
Tpm1P58771 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.48□□□□□ -0.41
Tpm1P58771 Gm18054-201ENSMUST00000207539 555 ntBASIC12.48□□□□□ -0.41
Tpm1P58771 Gm21769-201ENSMUST00000211922 111 ntBASIC12.48□□□□□ -0.41
Tpm1P58771 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.48□□□□□ -0.41
Tpm1P58771 Gm9797-202ENSMUST00000218003 294 ntBASIC12.48□□□□□ -0.41
Tpm1P58771 Gm9368-201ENSMUST00000219348 831 ntBASIC12.48□□□□□ -0.41
Tpm1P58771 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Tpm1P58771 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tpm1P58771 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
Tpm1P58771 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.47□□□□□ -0.41
Tpm1P58771 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.47□□□□□ -0.41
Tpm1P58771 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC12.47□□□□□ -0.41
Tpm1P58771 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.47□□□□□ -0.41
Tpm1P58771 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Tpm1P58771 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Gm11573-201ENSMUST00000119956 394 ntBASIC12.47□□□□□ -0.41
Tpm1P58771 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.47□□□□□ -0.41
Tpm1P58771 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tpm1P58771 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Gm8885-201ENSMUST00000189382 598 ntBASIC12.47□□□□□ -0.41
Tpm1P58771 Gm6621-201ENSMUST00000193251 772 ntBASIC12.47□□□□□ -0.41
Tpm1P58771 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.47□□□□□ -0.41
Tpm1P58771 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.47□□□□□ -0.41
Tpm1P58771 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.47□□□□□ -0.41
Tpm1P58771 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.47□□□□□ -0.41
Tpm1P58771 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.47□□□□□ -0.41
Tpm1P58771 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.47□□□□□ -0.41
Tpm1P58771 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tpm1P58771 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tpm1P58771 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.47□□□□□ -0.41
Tpm1P58771 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tpm1P58771 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tpm1P58771 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tpm1P58771 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.46□□□□□ -0.41
Tpm1P58771 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms