Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkn2bP55271 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkn2bP55271 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkn2bP55271 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkn2bP55271 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkn2bP55271 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.71□□□□□ -0.7
Cdkn2bP55271 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkn2bP55271 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkn2bP55271 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkn2bP55271 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.7□□□□□ -0.7
Cdkn2bP55271 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm23061-201ENSMUST00000102348 116 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Cdkn2bP55271 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm12501-201ENSMUST00000119163 529 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm24844-201ENSMUST00000158679 127 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm7584-201ENSMUST00000175829 940 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm21778-201ENSMUST00000178779 471 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm28746-201ENSMUST00000187453 380 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm43630-201ENSMUST00000201550 776 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm18730-201ENSMUST00000218038 343 ntBASIC10.7□□□□□ -0.7
Cdkn2bP55271 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn2bP55271 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm8111-201ENSMUST00000117659 987 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm13350-201ENSMUST00000120519 479 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm15595-201ENSMUST00000120840 961 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm19246-201ENSMUST00000173599 255 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm5733-201ENSMUST00000190232 939 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm29067-201ENSMUST00000190821 470 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm43179-201ENSMUST00000198797 275 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn2bP55271 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms