Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lhx3P50481 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lhx3P50481 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.34□□□□□ -0.59
Lhx3P50481 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.34□□□□□ -0.59
Lhx3P50481 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.34□□□□□ -0.59
Lhx3P50481 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.34□□□□□ -0.59
Lhx3P50481 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.34□□□□□ -0.59
Lhx3P50481 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.34□□□□□ -0.59
Lhx3P50481 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 Gm5302-201ENSMUST00000202130 796 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.34□□□□□ -0.59
Lhx3P50481 Gm9102-201ENSMUST00000219250 465 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 Gm7525-201ENSMUST00000219425 454 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 Gm3619-201ENSMUST00000219947 775 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 Gm16380-201ENSMUST00000077997 478 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.34□□□□□ -0.59
Lhx3P50481 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.34□□□□□ -0.59
Lhx3P50481 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Lhx3P50481 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Lhx3P50481 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx3P50481 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lhx3P50481 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.33□□□□□ -0.59
Lhx3P50481 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lhx3P50481 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lhx3P50481 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lhx3P50481 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Lhx3P50481 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.33□□□□□ -0.6
Lhx3P50481 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.33□□□□□ -0.6
Lhx3P50481 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Gm22442-201ENSMUST00000157256 144 ntBASIC11.33□□□□□ -0.6
Lhx3P50481 Gm16165-201ENSMUST00000160140 795 ntBASIC11.33□□□□□ -0.6
Lhx3P50481 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.33□□□□□ -0.6
Lhx3P50481 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.33□□□□□ -0.6
Lhx3P50481 Gm9081-201ENSMUST00000182346 991 ntBASIC11.33□□□□□ -0.6
Lhx3P50481 Gm8492-201ENSMUST00000182375 987 ntBASIC11.33□□□□□ -0.6
Lhx3P50481 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.33□□□□□ -0.6
Lhx3P50481 Platr10-202ENSMUST00000191479 818 ntBASIC11.33□□□□□ -0.6
Lhx3P50481 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Gm38210-201ENSMUST00000191944 809 ntBASIC11.33□□□□□ -0.6
Lhx3P50481 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.33□□□□□ -0.6
Lhx3P50481 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.33□□□□□ -0.6
Lhx3P50481 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.33□□□□□ -0.6
Lhx3P50481 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Lhx3P50481 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lhx3P50481 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.33□□□□□ -0.6
Lhx3P50481 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx3P50481 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx3P50481 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx3P50481 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.32□□□□□ -0.6
Lhx3P50481 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx3P50481 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Lhx3P50481 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx3P50481 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms