Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SftpbP50405 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SftpbP50405 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SftpbP50405 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.45□□□□□ -0.58
SftpbP50405 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SftpbP50405 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.44□□□□□ -0.58
SftpbP50405 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
SftpbP50405 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.44□□□□□ -0.58
SftpbP50405 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Gm13263-201ENSMUST00000121271 838 ntBASIC11.44□□□□□ -0.58
SftpbP50405 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.44□□□□□ -0.58
SftpbP50405 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.44□□□□□ -0.58
SftpbP50405 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.44□□□□□ -0.58
SftpbP50405 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.44□□□□□ -0.58
SftpbP50405 Gm7504-201ENSMUST00000201449 424 ntBASIC11.44□□□□□ -0.58
SftpbP50405 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.44□□□□□ -0.58
SftpbP50405 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.44□□□□□ -0.58
SftpbP50405 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.44□□□□□ -0.58
SftpbP50405 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.44□□□□□ -0.58
SftpbP50405 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.44□□□□□ -0.58
SftpbP50405 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SftpbP50405 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SftpbP50405 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
SftpbP50405 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Gm15329-201ENSMUST00000121408 155 ntBASIC11.43□□□□□ -0.58
SftpbP50405 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.43□□□□□ -0.58
SftpbP50405 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.43□□□□□ -0.58
SftpbP50405 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.43□□□□□ -0.58
SftpbP50405 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.43□□□□□ -0.58
SftpbP50405 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SftpbP50405 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.43□□□□□ -0.58
SftpbP50405 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SftpbP50405 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms